When working DeepVariant, the software program could make the most of a chosen short-term listing, corresponding to `/tmp/tmpcgn0s8jv`, to retailer intermediate information generated through the variant calling course of. This listing serves as a workspace for holding information like aligned reads, assembled candidate variants, and different short-term outputs. The precise listing path, usually randomly generated inside the `/tmp` filesystem, ensures that these information are remoted and managed effectively.
Storing intermediate information in a chosen location affords a number of benefits. It facilitates environment friendly information administration, as all intermediate outputs are consolidated inside a single, simply accessible location. This streamlines the variant calling workflow and simplifies cleanup procedures after the evaluation completes. Moreover, using the short-term filesystem (`/tmp`) leverages its inherent properties information saved inside `/tmp` are sometimes eliminated upon system reboot, stopping accumulation of pointless information. This automated cleanup mechanism contributes to environment friendly disk house utilization and reduces the danger of cluttering the first file system with short-term information. This apply additionally promotes reproducibility, as subsequent runs might doubtlessly leverage cached information if obtainable and correctly configured.
